The site isn't sold out, Samtec parts just tend to not be stocked by wholesalers like AVNET and DigiKey. They don't sell enough of them to keep them in stock, but you can still order them and it just takes a couple extra days for them to get the parts from Samtec and then send them on to you. The -02 thickness only comes with weld tabs, I dremeled them off. The only issue I can forsee is that the socket isn't very deep, and I'm not sure how good a connection you'll get if the board it's mounted too isn't completely flush with the bottom of the SNES. Breaking this out to an ICD header is easy. I've already made EAGLE footprints for both the -01 and -02 variants. I didn't get any samples of the -01's, but the -02 seems to fit snugly enough. I tried etching a board for it and failed twice... I hate broken traces

I'll try again tomorrow if I get the chance. Honestly, it would be easier to mount male pins to the board, which would mate with a standard IDC ribbon cable. You'd need an additional male-male adapter on the other end of the cable to connect it to a breadboard, but that's not a big deal...
Yes, these are surface mount parts, and no, I couldn't find a through-hole alternative. 2mm pitch is pretty gigantic for SMD, so it shouldn't be too hard. The one annoying thing is that the pins are a bit recessed under the connector, so they are a little tricky to get to. I've been meaning to write up a blog post chronicling my experiences in learning to surface mount solder... maybe I'll get around to it one of these days. There is a lot of information on the internet, but it took a lot of trial and error to find something that worked well and consistently for me. Some tips off the top of my head:
Equipment:
Absolute necessity
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Decent soldering iron, adjustable temp, preferably w/removable tips. It doesn't have to be a $200 iron, mine was $35, but the $15 electronics store crap isn't worth the cardboard packaging it comes in.
Liquid rosin flux. Stay away from water-soluble flux, it's more trouble than it's worth, especially early on. I have a bottle with a brush attached to the cap, but some people prefer syringes (they make less mess).
High quality, fine-tipped tweezers. I prefer bent tips. You want tips fine enough that you have to worry about jabbing yourself with them. Big, fat tweezers are useless. Look somewhere like Jameco or SparkFun, somewhere dedicated to electronics hobby work, and they'll have good tweezers.
Desoldering braid. Use it for removing excess solder from bridged pins. On surface mount pins, the surface tension of the solder is such that desoldering braid will almost never actually desolder the pin. I tend to just flood the whole row of pins with solder, creating one big bridge, then suck it back up with the desoldering braid and it's done.
Nice to have
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Brass tip cleaner. It's a lot nicer and works far better than a sponge.
Desoldering pump. Useful on through-hole pins, not so much on surface mount.
ChipQuik. This is the easiest way to desolder surface mount chips. It's a low-temp solder that stays liquid for a very long time. Apply the flux that comes with it, flood every pin on the chip with ChipQuik, then go back around one more time to heat up all of the ChipQuik and pull the chip right off.
Magnifying glass. Nice if it's attached to a helping hand clamp as well.
Dental pick. It's nice for a lot of things...
My basic strategy is clean the board with 99% isopropyl alcohol, then apply liquid flux to the pins. Position the chip, then apply solder to one of the pins in one of the corners. Once the corner is tacked down, reheat the solder you just applied while manipulating the chip with the tweezers to ensure the pins are all properly aligned. Now, apply solder to the opposite corner and repeat the heat-and-position until the pins are perfectly aligned. Next, I apply solder across all of the pins, typically bridging all of the pins together on smaller pitch parts. Then, use the desoldering braid to remove excess solder and any bridges. Check for shorts and fix as necessary. Keep in mind that the more you reheat the same solder, the less it wants to flow, so some times you have to add new solder to a bridged pin in order to get it to flow into the desoldering braid. Getting solder to flow nicely is one of the most important things to get a feel for, and it takes practice. Solder won't flow onto to a cold pin or pad, you have to apply the iron to the connection itself and then bring the solder to it, don't apply the solder to the iron and then bring that to the connection.
...that's most of the tips I can think of right now... it's late, I need sleep. If I get a board etched successfully, I'll let you know how it goes.